CDS

Accession Number TCMCG051C22601
gbkey CDS
Protein Id XP_002310869.1
Location join(857919..857989,858076..858187,858311..858329,858430..858518,858610..858663,859517..859587,859674..859755,860320..860416,860518..860588)
Gene LOC7480190
GeneID 7480190
Organism Populus trichocarpa

Protein

Length 221aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_002310833.3
Definition very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category I
Description Catalyzes the third of the four reactions of the long- chain fatty acids elongation cycle. This endoplasmic reticulum- bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors of membrane lipids and lipid mediators
KEGG_TC -
KEGG_Module M00415        [VIEW IN KEGG]
KEGG_Reaction R07760        [VIEW IN KEGG]
R10827        [VIEW IN KEGG]
KEGG_rclass RC00770        [VIEW IN KEGG]
RC01095        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01004        [VIEW IN KEGG]
KEGG_ko ko:K10703        [VIEW IN KEGG]
EC 4.2.1.134        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00062        [VIEW IN KEGG]
ko01040        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01212        [VIEW IN KEGG]
map00062        [VIEW IN KEGG]
map01040        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01212        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005789        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006631        [VIEW IN EMBL-EBI]
GO:0006633        [VIEW IN EMBL-EBI]
GO:0006643        [VIEW IN EMBL-EBI]
GO:0006665        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0016829        [VIEW IN EMBL-EBI]
GO:0016835        [VIEW IN EMBL-EBI]
GO:0016836        [VIEW IN EMBL-EBI]
GO:0018812        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030148        [VIEW IN EMBL-EBI]
GO:0030176        [VIEW IN EMBL-EBI]
GO:0030497        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031227        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0042175        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044432        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0046467        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072330        [VIEW IN EMBL-EBI]
GO:0098827        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGAGGATTTTGTCACTCCTCAGGCGCCTGTACCTGACGGTCTATAACTGGGCAGTCTTCCTAGGCTGGTCTCAGGTGTTGTTTCTTGCTGTGAAAACGTTAAAAGATTCGGGCCATGAACATGTCTACAATGCTGTCGAGAAGCCTCTTCAGCTCGCTCAAACTGCTGCTGTTTTGGAGATTCTTCATGGTCTAGTAGGGTTGGTGAGGTCTCCAATAACAGCAACACTGCCCCAGATTGGTTCAAGACTGTATCTAACATGGATCATCTTATATAGTTTCCCTGAGATTCGGTCCCACTTTCTTGTTACTTCTTTGGTCATTAGCTGGTCAATCACAGAGATTATTCGGTATTCTTTCTTTGGCGTGAAGGAGGTACTTGGTTTTGCACCTTCATGGCTCATGTGGCTCAGGTACAGCACCTTTTTGCTGTTGTATCCAACTGGTATCAGCAGTGAGGTTGGTCTAGTATATTTCGCCTTGCCATACATTAAGGGATCTGAAAAATATTGTTTAAGGATGCCCAACAAATGGAACTTTTCTTTTGACAACTTCTACGCTGCAATTCTTGTGCTTGGAATTTACATCCCAGGCAGCCCTCACATGTACAGCTATATGCTTGGGCAGAGAAAGAAAGCTCTCTCTAAATCAAAAAGGGAGTAG
Protein:  
MARILSLLRRLYLTVYNWAVFLGWSQVLFLAVKTLKDSGHEHVYNAVEKPLQLAQTAAVLEILHGLVGLVRSPITATLPQIGSRLYLTWIILYSFPEIRSHFLVTSLVISWSITEIIRYSFFGVKEVLGFAPSWLMWLRYSTFLLLYPTGISSEVGLVYFALPYIKGSEKYCLRMPNKWNFSFDNFYAAILVLGIYIPGSPHMYSYMLGQRKKALSKSKRE